I think you will need to replace the long FSJ input shaft with a short shaft. You should be able to use the T150 bellhsg (need to add a carriage bolt or wheel stud), then grind the shift fork for clearance. The D20 should bolt right up if you have the factory cast adapter; I'm not sure if this cast adapter is different for other tcases. The D20 linkage will need to be swapped or lengthened to get it back close to where it was in the CJ. The T150 mount will not work, you'll can replace or mod. the U-channel section with a piece of 3/8"-1/2" plate. The tranny skid plate will have to move back one set of holes (on 76-79 CJ, other CJs may require new holes). Front driveshaft gets longer, rear gets shorter.
That's off the top of my head from doing this swap over 5 years ago; it can be confusing, good luck!